AMRLevelMushyLayer Member List

This is the complete list of members for AMRLevelMushyLayer, including all inherited members.

addHeatSource(LevelData< FArrayBox > &src)	AMRLevelMushyLayer	protected
addMeltPond(int depth, Real salinity, Real enthalpy, bool rescaleExistingSolution=false)	AMRLevelMushyLayer
addMeltPond()	AMRLevelMushyLayer	protected
addPerturbation(int a_var, Real alpha, int waveNumber=-1, Real phaseShift=0)	AMRLevelMushyLayer	protected
addVortex(RealVect center, Real strength, Real radius)	AMRLevelMushyLayer
advance()	AMRLevelMushyLayer	virtual
advectActiveTracer()	AMRLevelMushyLayer	protected
advectLambda(bool doFRupdates=true)	AMRLevelMushyLayer	protected
advectPassiveTracer()	AMRLevelMushyLayer	protected
advectScalar(const int a_scalarVar, const int a_advectionVar, LevelData< FluxBox > &a_advVel, bool doFRupdates=true)	AMRLevelMushyLayer	protected
advectScalar(const int a_scalarVar, const int a_advectionVar, LevelData< FluxBox > &a_advVel, bool doFRupdates, LevelData< FluxBox > &flux)	AMRLevelMushyLayer	protected
advectTracer(int a_tracerVar, LevelData< FArrayBox > &a_src)	AMRLevelMushyLayer	protected
AMREnthalpySum_new	AMRLevelMushyLayer	protected
AMREnthalpySum_old	AMRLevelMushyLayer	protected
AMRLevel()	AMRLevel
AMRLevelMushyLayer()	AMRLevelMushyLayer	inline
AMRLevelMushyLayer(MushyLayerOptions a_opt, MushyLayerParams a_params)	AMRLevelMushyLayer	inline
AMRRefluxLambda()	AMRLevelMushyLayer	protected
AMRSaltSum_new	AMRLevelMushyLayer	protected
AMRSaltSum_old	AMRLevelMushyLayer	protected
averageOverLiquidRegion(int a_var)	AMRLevelMushyLayer	protected
backupTimestep()	AMRLevelMushyLayer	protected
boxes() const	AMRLevel	virtual
calculateAnalyticSolns(bool enforceSolutions=true)	AMRLevelMushyLayer	protected
calculateCoarseFineBoundaries(int a_var, bool vector=false)	AMRLevelMushyLayer	protected
calculatePermeability()	AMRLevelMushyLayer	protected
calculateTimeIndAdvectionVel(Real a_time, LevelData< FluxBox > &a_advVel)	AMRLevelMushyLayer	protected
compute_d_dt(const int a_var, LevelData< FArrayBox > &diff, bool vector=false)	AMRLevelMushyLayer	protected
computeActiveTracerSourceSink(LevelData< FArrayBox > &a_srcSink)	AMRLevelMushyLayer	protected
computeAdvectionVelocities(LevelData< FArrayBox > &advectionSrc, Real advVelCentering=0.5)	AMRLevelMushyLayer	protected
computeAdvectionVelSourceTerm(LevelData< FArrayBox > &advectionSourceTerm)	AMRLevelMushyLayer	protected
computeAllVelocities(bool doFRupdates)	AMRLevelMushyLayer
computeCCvelocity(const LevelData< FArrayBox > &advectionSourceTerm, Real a_oldTime, Real a_dt, bool doFRupdates=false, bool a_doProjection=true, bool compute_uDelU=true, bool a_MACprojection=false)	AMRLevelMushyLayer	protected
computeChimneyDiagnostics()	AMRLevelMushyLayer
computeDiagnostics()	AMRLevelMushyLayer
computeDt()	AMRLevelMushyLayer	virtual
computeDt(Real cfl)	AMRLevelMushyLayer	protected
computeDt(bool growdt)	AMRLevelMushyLayer	protected
computeDtInit(int finest_level)	AMRLevelMushyLayer	protected
computeGradP(LevelData< FArrayBox > &gradP, Real a_time, bool a_macProjection=false)	AMRLevelMushyLayer	protected
computeInflowOutflowAdvVel()	AMRLevelMushyLayer	protected
computeInitAdvectionVel()	AMRLevelMushyLayer	protected
computeInitialDt()	AMRLevelMushyLayer	virtual
computeLambdaPorosity()	AMRLevelMushyLayer
computeLapVel(LevelData< FArrayBox > &a_lapVel, LevelData< FArrayBox > &a_vel, const LevelData< FArrayBox > *a_crseVelPtr)	AMRLevelMushyLayer	protected
computeMaxUChi()	AMRLevelMushyLayer	protected
computeMushDepth(Real a_porosity_criteria=0.99)	AMRLevelMushyLayer	protected
computePredictedVelocities(LevelData< FluxBox > &U_chi_new, LevelData< FArrayBox > &a_traceVel, LevelData< FluxBox > &a_advVel, LevelData< FArrayBox > &U_chi, const LevelData< FArrayBox > &a_viscousSource, PatchGodunov &a_patchGodVelocity, LevelData< FluxBox > &a_grad_eLambda, LevelData< FluxBox > &a_gradPhi, LevelData< FluxBox > &porosityFace, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
computeRadianceIntensity()	AMRLevelMushyLayer	protected
computeScalarAdvectiveFlux(LevelData< FluxBox > &a_edgeScal, LevelData< FArrayBox > &a_old_scal, LevelData< FluxBox > &a_adv_vel, LevelData< FluxBox > &a_inflowOutflowVel, LevelData< FArrayBox > &a_old_vel, LevelData< FArrayBox > &a_diffusiveSrc, PatchGodunov &a_patchGod, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
computeScalarAdvectiveFlux(LevelData< FluxBox > &a_edgeScal, LevelData< FArrayBox > &a_scalar_advection_old, LevelData< FArrayBox > &a_src, LevelData< FluxBox > &a_advVel, int a_advectionVar, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
computeScalarAdvectiveFlux(LevelData< FluxBox > &a_edgeScal, int a_advectionVar, int a_diffusionVar, LevelData< FluxBox > &a_advVel, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
computeScalarAdvectiveFluxMultiComp(LevelData< FluxBox > &a_edgeScal, LevelData< FluxBox > &a_advVel, PatchGodunov &a_patchGod, LevelData< FArrayBox > &a_scalOld, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
computeScalarAdvectiveSrc(LevelData< FArrayBox > &a_src, int a_var, bool converged, int a_comp=0)	AMRLevelMushyLayer	protected
computeScalarAdvectiveSrcHC(LevelData< FArrayBox > &a_src, LevelData< FluxBox > &edgeScalTotal, bool converged)	AMRLevelMushyLayer	protected
computeScalarConcInLiquid(LevelData< FArrayBox > &liquid_tracer_conc, int a_tracerVar)	AMRLevelMushyLayer	protected
computeScalarDiffusiveSrc(int a_scalarBulkConc, LevelData< FArrayBox > &a_src)	AMRLevelMushyLayer	protected
computeScalDiffusion(const int a_var, LevelData< FArrayBox > &a_lapScal, Real a_time)	AMRLevelMushyLayer	protected
computeScalDiffusion(LevelData< FArrayBox > &diffusiveSrc, Real a_time)	AMRLevelMushyLayer	protected
computeScalDiffusion(LevelData< FArrayBox > &a_src, int a_var)	AMRLevelMushyLayer	protected
computeTotalAdvectiveFluxes(LevelData< FluxBox > &edgeScalTotal)	AMRLevelMushyLayer	protected
computeUDelU(LevelData< FArrayBox > &U_adv_src, const LevelData< FArrayBox > &advectionSourceTerm, Real a_oldTime, Real a_dt)	AMRLevelMushyLayer	protected
computeUstar(LevelData< FArrayBox > &a_uDelu, const LevelData< FArrayBox > &advectionSourceTerm, Real a_oldTime, Real a_dt, bool doFRupdates, bool a_MACprojection=false, bool compute_uDelU=true)	AMRLevelMushyLayer	protected
computeUstarSrc(LevelData< FArrayBox > &src, const LevelData< FArrayBox > &advectionSourceTerm, Real src_time, bool a_MACprojection=false, bool compute_uDelU=true)	AMRLevelMushyLayer	protected
computeViscosity()	AMRLevelMushyLayer	protected
computeVorticity()	AMRLevelMushyLayer
computeVorticityStreamfunction()	AMRLevelMushyLayer
conclude(int a_step) const	AMRLevel	virtual
convergedToSteadyState()	AMRLevelMushyLayer	virtual
convergedToSteadyState(const int a_var, bool vector=false)	AMRLevelMushyLayer	protected
convertBCType(const int a_implicitBC, const Real a_implicitVal, int &a_explicitBC, Real a_explicitVal)	AMRLevelMushyLayer	protected
convertBCType(const int a_implicitBC)	AMRLevelMushyLayer	protected
copyNewToOldStates()	AMRLevelMushyLayer	protected
correctEdgeCentredVelocity(LevelData< FluxBox > &a_advVel, Real a_dt)	AMRLevelMushyLayer	protected
crashed()	AMRLevelMushyLayer	protected
createDataStructures()	AMRLevelMushyLayer
define(MushyLayerOptions a_opt, MushyLayerParams a_params)	AMRLevelMushyLayer
define(AMRLevel *a_coarserLevelPtr, const Box &a_problemDomain, int a_level, int a_refRatio)	AMRLevelMushyLayer	inlinevirtual
define(AMRLevel *a_coarserLevelPtr, const ProblemDomain &a_problemDomain, int a_level, int a_refRatio)	AMRLevelMushyLayer	virtual
defineCFInterp()	AMRLevelMushyLayer
defineIBCs()	AMRLevelMushyLayer	protected
defineRegridAMROp(AMRPoissonOpFactory &a_factory, const Vector< DisjointBoxLayout > &a_grids, const Vector< ProblemDomain > &a_domains, const Vector< Real > &a_amrDx, const Vector< int > &a_refRatios, const int &a_lBase)	AMRLevelMushyLayer	protected
defineSolvers(Real a_time)	AMRLevelMushyLayer
defineUstarMultigrid()	AMRLevelMushyLayer	protected
defineUstarSolver(Vector< RefCountedPtr< LevelBackwardEuler > > &a_UstarBE, Vector< RefCountedPtr< LevelTGA > > &a_UstarTGA)	AMRLevelMushyLayer	protected
doExplicitReflux(int a_var)	AMRLevelMushyLayer
doHCreflux()	AMRLevelMushyLayer
doMomentumReflux(Vector< LevelData< FArrayBox > *> &compVel)	AMRLevelMushyLayer
doPostRegridSmoothing(bool a_smoothVel=true, bool a_smoothScalar=true)	AMRLevelMushyLayer
doRegularisationOps(LevelData< FArrayBox > &a_scal, int a_var, int a_comp=0)	AMRLevelMushyLayer	protected
doRegularisationOps(LevelData< FluxBox > &a_scal, int a_var, int a_comp=0)	AMRLevelMushyLayer	protected
doRegularisationOps(int a_var, FArrayBox &a_state, int a_comp=0)	AMRLevelMushyLayer	protected
doRegularisationOpsNew(int a_var, FArrayBox &a_state, int a_comp=0)	AMRLevelMushyLayer	protected
doVelocityAdvection()	AMRLevelMushyLayer	protected
dt(Real a_dt)	AMRLevel	virtual
dt() const	AMRLevel	virtual
dx(Real newDx)	AMRLevelMushyLayer
dx()	AMRLevelMushyLayer
fillAdvVel(Real time, LevelData< FluxBox > &a_advVel)	AMRLevelMushyLayer	protected
fillAMRLambda(Vector< LevelData< FArrayBox > *> &amrLambda)	AMRLevelMushyLayer	protected
fillAMRVelPorosity(Vector< LevelData< FArrayBox > *> &amrVel, Vector< RefCountedPtr< LevelData< FluxBox > > > &amrPorosityFace, Vector< RefCountedPtr< LevelData< FArrayBox > > > &amrPorosity)	AMRLevelMushyLayer	protected
fillAnalyticVel(LevelData< FluxBox > &a_advVel)	AMRLevelMushyLayer	protected
fillAnalyticVel(FArrayBox &velDir, int dir, int comp, bool project)	AMRLevelMushyLayer	protected
fillAnalyticVel(LevelData< FArrayBox > &velDir)	AMRLevelMushyLayer	protected
fillBuoyancy(LevelData< FArrayBox > &a_buoyancy, Real a_time)	AMRLevelMushyLayer	protected
fillBuoyancy(LevelData< FArrayBox > &a_buoyancy, LevelData< FArrayBox > &a_temperature, LevelData< FArrayBox > &a_liquidConc, LevelData< FArrayBox > &a_porosity)	AMRLevelMushyLayer	protected
fillBuoyancy(FArrayBox &buoyancy, FArrayBox &temperature, FArrayBox &liquidConc, FArrayBox &porosity, FArrayBox &bodyForce)	AMRLevelMushyLayer	protected
fillBuoyancy(LevelData< FArrayBox > &a_buoyancy, Real a_time, bool quadInterp)	AMRLevelMushyLayer	protected
fillFixedPorosity(LevelData< FArrayBox > &a_porosity)	AMRLevelMushyLayer	protected
fillFrameVelocity()	AMRLevelMushyLayer	protected
fillHC(LevelData< FArrayBox > &a_phi, Real a_time, bool doInterior=true, bool quadInterp=true)	AMRLevelMushyLayer	protected
fillMultiComp(LevelData< FArrayBox > &a_phi, Real a_time, int scal1, int scal2, bool doInterior=true, bool quadInterp=true, bool apply_bcs=true)	AMRLevelMushyLayer	protected
fillPressureSrcTerm(LevelData< FArrayBox > &gradP, LevelData< FArrayBox > &pressureScale, Real a_time, bool a_MACprojection)	AMRLevelMushyLayer	protected
fillScalarFace(LevelData< FluxBox > &a_scal, Real a_time, const int a_var, bool doInterior=false, bool quadInterp=false)	AMRLevelMushyLayer	protected
fillScalarFace(LevelData< FluxBox > &a_scal, Real a_time, const int a_var, CellToEdgeAveragingMethod method, bool doInterior=false, bool quadInterp=false, Real smoothing=0.0)	AMRLevelMushyLayer	protected
fillScalars(LevelData< FArrayBox > &a_scal, Real a_time, const int a_var, bool doInterior=false, bool quadInterp=false, int a_comp=0, bool apply_bcs=true)	AMRLevelMushyLayer	protected
fillTCl(LevelData< FArrayBox > &a_phi, Real a_time, bool doInterior=true, bool quadInterp=true)	AMRLevelMushyLayer	protected
fillUnprojectedDarcyVelocity(LevelData< FluxBox > &a_advVel, Real time)	AMRLevelMushyLayer	protected
fillVectorField(LevelData< FArrayBox > &a_vector, Real a_time, int a_var, bool doInterior=false, bool quadInterp=false)	AMRLevelMushyLayer	protected
finerLevelPtr(AMRLevel *a_finer_level_ptr)	AMRLevel	virtual
finestLevel()	AMRLevelMushyLayer	protected
getAMRLevelHierarchy()	AMRLevel
getCoarserLevel() const	AMRLevelMushyLayer	protected
getCoarseScalarDataPointers(const int a_scalarVar, LevelData< FArrayBox > **a_coarserDataOldPtr, LevelData< FArrayBox > **a_coarserDataNewPtr, LevelFluxRegister **a_coarserFRPtr, LevelFluxRegister **a_finerFRPtr, Real &a_tCoarserOld, Real &a_tCoarserNew)	AMRLevelMushyLayer	protected
getCoarsestLevel()	AMRLevelMushyLayer	protected
getExtraPlotFields()	AMRLevelMushyLayer
getFinerLevel() const	AMRLevelMushyLayer	protected
getFinestLevel()	AMRLevelMushyLayer	protected
getHierarchyAndGrids(Vector< AMRLevelMushyLayer *> &a_hierarchy, Vector< DisjointBoxLayout > &a_grids, Vector< int > &a_refRat, ProblemDomain &a_lev0Dom, Real &a_lev0Dx)	AMRLevelMushyLayer	protected
getMaxAdvVel()	AMRLevelMushyLayer	protected
getMaxLevel()	AMRLevelMushyLayer	protected
getMaxVelocity()	AMRLevelMushyLayer	protected
getMaxVelocityForCFL()	AMRLevelMushyLayer	protected
getScalarBCs(BCHolder &thisBC, int a_var, bool a_homogeneous)	AMRLevelMushyLayer	protected
getScalarIBCs(int a_var)	AMRLevelMushyLayer	protected
getTotalFlux(LevelData< FluxBox > &totalFlux)	AMRLevelMushyLayer	protected
grids()	AMRLevelMushyLayer
hasCoarserLevel() const	AMRLevel
hasFinerLevel() const	AMRLevel
horizAverage()	AMRLevelMushyLayer
horizontallyAverage(LevelData< FArrayBox > &a_averaged, LevelData< FluxBox > &a_phi)	AMRLevelMushyLayer	protected
horizontallyAverage(Vector< Real > &averageVector, LevelData< FluxBox > &a_phi)	AMRLevelMushyLayer	protected
horizontallyAverage(LevelData< FArrayBox > &a_averaged, LevelData< FluxBox > &a_phi, Vector< Real > &averageVector)	AMRLevelMushyLayer	protected
horizontallyAverage(LevelData< FArrayBox > &a_averaged, LevelData< FArrayBox > &a_phi)	AMRLevelMushyLayer	protected
horizontallyAverage(Vector< Real > &averageVector, LevelData< FArrayBox > &a_phi)	AMRLevelMushyLayer	protected
horizontallyAverage(LevelData< FArrayBox > &a_averaged, LevelData< FArrayBox > &a_phi, Vector< Real > &globalAveraged)	AMRLevelMushyLayer	protected
incrementHCFluxRegisters(LevelData< FluxBox > &flux, Real fluxMult)	AMRLevelMushyLayer	protected
initDataStructures()	AMRLevelMushyLayer
initialData()	AMRLevelMushyLayer	virtual
initialDataBurgers()	AMRLevelMushyLayer
initialDataConvectionMixedPorous()	AMRLevelMushyLayer
initialDataCornerFlow()	AMRLevelMushyLayer
initialDataDefault()	AMRLevelMushyLayer
initialDataDiffusion()	AMRLevelMushyLayer
initialDataHRL()	AMRLevelMushyLayer
initialDataIceBlock()	AMRLevelMushyLayer
initialDataMushyLayer()	AMRLevelMushyLayer
initialDataPoiseuille()	AMRLevelMushyLayer
initialDataPorousHole()	AMRLevelMushyLayer
initialDataRayleighBenard()	AMRLevelMushyLayer
initialDataRefluxTest()	AMRLevelMushyLayer
initialDataSidewallHeating()	AMRLevelMushyLayer
initialDataSoluteFlux()	AMRLevelMushyLayer
initialDataVortexPair()	AMRLevelMushyLayer
initialDataZeroPorosityTest()	AMRLevelMushyLayer
initialDtMultiplier(Real a_initial_dt_multiplier)	AMRLevel	virtual
initialDtMultiplier() const	AMRLevel	virtual
initialGrid(const Vector< Box > &a_newGrids)	AMRLevelMushyLayer	virtual
initializeGlobalPressure(Real dtInit=-1, bool init=true)	AMRLevelMushyLayer	protected
initializeLevelPressure(Real a_currentTime, Real a_dtInit)	AMRLevelMushyLayer	protected
initTimeIndependentPressure(AMRLevelMushyLayer *lev, int a_max_num_iter=-1)	AMRLevelMushyLayer	protected
isCurrentCFLSafe(bool printWarning=false)	AMRLevelMushyLayer	protected
isDefined() const	AMRLevel
isVelocityTimeDependent()	AMRLevelMushyLayer	protected
level() const	AMRLevel	virtual
levelSetup()	AMRLevelMushyLayer
loadAdvVel()	AMRLevelMushyLayer	inline
m_adv_vel_centering	AMRLevelMushyLayer	protected
m_adv_vel_centering_growth	AMRLevelMushyLayer	protected
m_advectionPhysicsVelocity	AMRLevelMushyLayer	protected
m_advPhysC	AMRLevelMushyLayer	protected
m_advPhysH	AMRLevelMushyLayer	protected
m_advPhysHC	AMRLevelMushyLayer	protected
m_advPhysSl	AMRLevelMushyLayer	protected
m_advPhysT	AMRLevelMushyLayer	protected
m_advPhysTSl	AMRLevelMushyLayer	protected
m_advVel	AMRLevelMushyLayer	protected
m_advVelNew	AMRLevelMushyLayer	protected
m_advVelOld	AMRLevelMushyLayer	protected
m_chkScalarVars	AMRLevelMushyLayer	protected
m_chkVectorVars	AMRLevelMushyLayer	protected
m_coarseAverageHC	AMRLevelMushyLayer	protected
m_coarseAverageScalar	AMRLevelMushyLayer	protected
m_coarseAverageVector	AMRLevelMushyLayer	protected
m_coarser_level_ptr	AMRLevel	protected
m_computedCFL	AMRLevelMushyLayer	protected
m_diagnostics	AMRLevelMushyLayer
m_diffuseAMRFASMG	AMRLevelMushyLayer	protected
m_diffuseAMRMG	AMRLevelMushyLayer	protected
m_domainHeight	AMRLevelMushyLayer	protected
m_domainWidth	AMRLevelMushyLayer	protected
m_dPorosity_dt	AMRLevelMushyLayer	protected
m_dt	AMRLevel	protected
m_dtReduction	AMRLevelMushyLayer	protected
m_dx	AMRLevelMushyLayer	protected
m_enforceGradP	AMRLevelMushyLayer	protected
m_enthalpySalinityBE	AMRLevelMushyLayer	protected
m_enthalpySalinityTGA	AMRLevelMushyLayer	protected
m_fineInterpScalar	AMRLevelMushyLayer	protected
m_fineInterpVector	AMRLevelMushyLayer	protected
m_finer_level_ptr	AMRLevel	protected
m_fluxRegHC	AMRLevelMushyLayer	protected
m_fluxRegisters	AMRLevelMushyLayer	protected
m_frameAdvVel	AMRLevelMushyLayer	protected
m_frameVel	AMRLevelMushyLayer	protected
m_grids	AMRLevelMushyLayer	protected
m_hasCoarser	AMRLevelMushyLayer	protected
m_hasFiner	AMRLevelMushyLayer	protected
m_HCOpFact	AMRLevelMushyLayer	protected
m_heatDomainFluxRegister	AMRLevelMushyLayer	protected
m_initial_dt_multiplier	AMRLevel	protected
m_isDefined	AMRLevelMushyLayer	protected
m_level	AMRLevel	protected
m_level_grids	AMRLevel	protected
m_makeFluxRegForScalarVar	AMRLevelMushyLayer	protected
m_makeFluxRegForVectorVar	AMRLevelMushyLayer	protected
m_max_dt_growth	AMRLevelMushyLayer	protected
m_maxLambda	AMRLevelMushyLayer	protected
m_multiCompFASMG	AMRLevelMushyLayer	protected
m_newGrids_different	AMRLevelMushyLayer	protected
m_numCells	AMRLevelMushyLayer	protected
m_numGhost	AMRLevelMushyLayer	protected
m_numGhostAdvection	AMRLevelMushyLayer	protected
m_numOutputComps	AMRLevelMushyLayer	protected
m_opt	AMRLevelMushyLayer	protected
m_outputScalarVars	AMRLevelMushyLayer	protected
m_outputVectorVars	AMRLevelMushyLayer	protected
m_parameters	AMRLevelMushyLayer	protected
m_patchGodC	AMRLevelMushyLayer	protected
m_patchGodH	AMRLevelMushyLayer	protected
m_patchGodHC	AMRLevelMushyLayer	protected
m_patchGodScalars	AMRLevelMushyLayer	protected
m_patchGodSl	AMRLevelMushyLayer	protected
m_patchGodT	AMRLevelMushyLayer	protected
m_patchGodTSl	AMRLevelMushyLayer	protected
m_patchGodVelocity	AMRLevelMushyLayer	protected
m_physBCPtr	AMRLevelMushyLayer	protected
m_piecewiseLinearFillPatchScalarFour	AMRLevelMushyLayer	protected
m_piecewiseLinearFillPatchScalarOne	AMRLevelMushyLayer	protected
m_piecewiseLinearFillPatchScalarThree	AMRLevelMushyLayer	protected
m_piecewiseLinearFillPatchScalarTwo	AMRLevelMushyLayer	protected
m_pressureScaleVar	AMRLevelMushyLayer	protected
m_prev_diag_output	AMRLevelMushyLayer	protected
m_problem_domain	AMRLevel	protected
m_projection	AMRLevelMushyLayer	protected
m_projectionBackup	AMRLevelMushyLayer	protected
m_quadCFInterpScalar	AMRLevelMushyLayer	protected
m_quadCFInterpVector	AMRLevelMushyLayer	protected
m_ref_ratio	AMRLevel	protected
m_regrid_smoothing_done	AMRLevelMushyLayer	protected
m_restartHalveDt enum value	AMRLevelMushyLayer	protected
m_restartResetData enum value	AMRLevelMushyLayer	protected
m_saltDomainFluxRegister	AMRLevelMushyLayer	protected
m_saltFluxBottom	AMRLevelMushyLayer	protected
m_saltFluxTop	AMRLevelMushyLayer	protected
m_scalarDiffusionCoeffs	AMRLevelMushyLayer	protected
m_scalarIBC	AMRLevelMushyLayer	protected
m_scalarNew	AMRLevelMushyLayer	protected
m_scalarOld	AMRLevelMushyLayer	protected
m_scalarRestart	AMRLevelMushyLayer	protected
m_scalarVarNames	AMRLevelMushyLayer	protected
m_scalRestartVars	AMRLevelMushyLayer	protected
m_time	AMRLevel	protected
m_timestepFailed	AMRLevelMushyLayer	protected
m_timestepReduced	AMRLevelMushyLayer	protected
m_totalAdvVel	AMRLevelMushyLayer	protected
m_useLimiting	AMRLevelMushyLayer	protected
m_usePrevPressureForUStar	AMRLevelMushyLayer	protected
m_uStarAMRMG	AMRLevelMushyLayer	protected
m_uStarOpFact	AMRLevelMushyLayer	protected
m_vectorFluxRegisters	AMRLevelMushyLayer	protected
m_vectorNew	AMRLevelMushyLayer	protected
m_vectorOld	AMRLevelMushyLayer	protected
m_vectorRestart	AMRLevelMushyLayer	protected
m_vectorVarNames	AMRLevelMushyLayer	protected
m_vectRestartVars	AMRLevelMushyLayer	protected
m_viscousOp	AMRLevelMushyLayer	protected
maxAllowedEta()	AMRLevelMushyLayer
multiCompAdvectDiffuse(LevelData< FArrayBox > &a_phi_old, LevelData< FArrayBox > &a_phi_new, LevelData< FArrayBox > &a_src, bool doFRupdates=false, bool computeAdvectiveSrc=true)	AMRLevelMushyLayer	protected
postInitialGrid(const bool a_restart)	AMRLevelMushyLayer	virtual
postInitialize()	AMRLevelMushyLayer	virtual
postRegrid(int a_base_level)	AMRLevelMushyLayer	virtual
postTimeStep()	AMRLevelMushyLayer	virtual
predictVelocities(LevelData< FArrayBox > &a_uDelU, LevelData< FluxBox > &a_advVel, const LevelData< FArrayBox > &a_src, Real old_time, Real a_dt, bool doFRupdates)	AMRLevelMushyLayer	protected
preRegrid(int a_base_level, const Vector< Vector< Box > > &a_new_grids)	AMRLevel	virtual
problemDomain() const	AMRLevel	virtual
readCheckpointHeader(HDF5Handle &a_handle)=0	AMRLevel	pure virtual
readCheckpointLevel(HDF5Handle &a_handle)=0	AMRLevel	pure virtual
refine(Real ref_ratio, DisjointBoxLayout a_grids, ProblemDomain a_domain)	AMRLevelMushyLayer
refRatio() const	AMRLevel	virtual
regrid(const Vector< Box > &a_newGrids)	AMRLevelMushyLayer	virtual
resetLambda()	AMRLevelMushyLayer	protected
reshapeData(DisjointBoxLayout newGrids, ProblemDomain newDomain)	AMRLevelMushyLayer
restartTimestepFromBackup(bool ignorePressure=false)	AMRLevelMushyLayer	protected
s_botSolverHC	AMRLevelMushyLayer	protectedstatic
s_botSolverUStar	AMRLevelMushyLayer	protectedstatic
s_implicit_reflux	AMRLevelMushyLayer	protected
s_regrid_smoothing_coeff	AMRLevelMushyLayer	protected
s_verbosity	AMRLevel	protectedstatic
set_compute_diagnostics(bool compute_diags)	AMRLevelMushyLayer
setAdvectionBCs()	AMRLevelMushyLayer	protected
setAdvVelCentering(Real a_fraction)	AMRLevelMushyLayer
setCCVelZero(Real a_limit)	AMRLevelMushyLayer
setDefaults()	AMRLevelMushyLayer
setDimensionlessReferenceEutectic()	AMRLevelMushyLayer
setDimensionlessReferenceInitial()	AMRLevelMushyLayer
setEta(Real a_eta)	AMRLevelMushyLayer
setFluxRegistersZero()	AMRLevelMushyLayer	protected
setPorosity(FArrayBox &a_porosity)	AMRLevelMushyLayer	protected
setSmoothingCoeff(Real a_coeff)	AMRLevelMushyLayer
setSmoothingDone(bool a_smoothingDone) (defined in AMRLevelMushyLayer)	AMRLevelMushyLayer
setVelZero(LevelData< FArrayBox > &a_vel, Real a_limit=-1, int a_radius=0)	AMRLevelMushyLayer
setVelZero(LevelData< FluxBox > &a_vel, Real a_limit=-1)	AMRLevelMushyLayer
setVelZero(FArrayBox &a_vel, const FArrayBox &a_porosity, const Real a_limit, const int a_radius=0)	AMRLevelMushyLayer	protected
shiftData(int dir, int distance)	AMRLevelMushyLayer
smoothEnthalpyBulkConc(Real a_smoothing) (defined in AMRLevelMushyLayer)	AMRLevelMushyLayer
smoothScalarField(LevelData< FArrayBox > &a_phi, int a_var, Real a_smoothing)	AMRLevelMushyLayer
solverRestart enum name	AMRLevelMushyLayer	protected
solvingFullDarcyBrinkman()	AMRLevelMushyLayer	protected
tagBoundaryLayerCells(IntVectSet &localTags)	AMRLevelMushyLayer
tagCells(IntVectSet &a_tags)	AMRLevelMushyLayer	virtual
tagCellsInit(IntVectSet &a_tags)	AMRLevelMushyLayer	virtual
tagCellsVar(IntVectSet &localTags, Real refineThresh, int taggingVar, int vectorTaggingVar, TaggingMethod taggingMethod, int comp=-1)	AMRLevelMushyLayer
tagCenterCells(IntVectSet &localTags, Real radius=0)	AMRLevelMushyLayer
tagMushLiquidBoundary(IntVectSet &localTags)	AMRLevelMushyLayer
tagMushyCells(IntVectSet &localTags)	AMRLevelMushyLayer
time(Real a_time)	AMRLevel	virtual
time() const	AMRLevel	virtual
traceAdvectionVel(LevelData< FluxBox > &a_advVel, LevelData< FArrayBox > &a_old_vel, LevelData< FArrayBox > &U_chi, const LevelData< FArrayBox > &a_viscousSource, PatchGodunov &a_patchGodVelocity, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
updateEnthalpyVariables()	AMRLevelMushyLayer
updateEnthalpyVariablesOld()	AMRLevelMushyLayer	protected
updateScalarFluxRegister(int a_scalarVar, LevelData< FluxBox > &flux, Real scale)	AMRLevelMushyLayer	protected
upwind(LevelData< FluxBox > &a_edgeScal, LevelData< FArrayBox > &a_old_scal, LevelData< FluxBox > &a_adv_vel, LevelData< FluxBox > &a_inflowOutflowVel, LevelData< FArrayBox > &a_old_vel, LevelData< FArrayBox > &a_diffusiveSrc, PatchGodunov &a_patchGod, Real a_old_time, Real a_dt)	AMRLevelMushyLayer	protected
verbosity()	AMRLevel	static
verbosity(int a_verbosity)	AMRLevel	static
writeAMRHierarchy(string filename)	AMRLevelMushyLayer
writeCheckpointHeader(HDF5Handle &a_handle) const=0	AMRLevel	pure virtual
writeCheckpointLevel(HDF5Handle &a_handle) const=0	AMRLevel	pure virtual
writeCustomPlotFile(const std::string &a_prefix, int a_step) const	AMRLevel	virtual
writePlotHeader(HDF5Handle &a_handle) const=0	AMRLevel	pure virtual
writePlotLevel(HDF5Handle &a_handle) const=0	AMRLevel	pure virtual
~AMRLevel()	AMRLevel	virtual
~AMRLevelMushyLayer()	AMRLevelMushyLayer	virtual